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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908347.1_cds_XP_016458461.1_52088
CDS Infomation

[gene=LOC107782133] [db_xref=GeneID:107782133] [protein=tRNA dimethylallyltransferase 9-like] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016458461.1] [location=join(44955..45215,45659..45712,45947..45989,46841..46949,47316..47514,47966..48188,48728..48822,48897..48991,49562..49637,50332..50471,50544..>50624)] [gbkey=CDS]
Sequence

ATGATAAGCACCGTCGGAACTGGCGGCGTTCGAATTAGCAGCTATCTCCGGCTTTCGTAC
ACGGCGGAGACGCCTCTCCTTCTTCCCAACGTGCTCTTCTTCCGCCGCTGCAGCCGCCGC
TTCTTCACATCCTGCTCTGCCTCCTCGACGAAGCAGAAAGTTATTGTCATTTCGGGACCC
ACCGGTGCCGGCAAAAGCAAGCTAGCATTAGAGCTCGCTAAGCAACTTAATGGTGAAATC
ATCAGCGCTGATTCTGTCCAGGTGTATCGAGGGCTTGATGTAGGTTCAGCGAAGCCTTCC
ATTCGTGAAAGAGAGGAAGTAGTACATCATCTGGTTGACATATTGCATCCATCTGAAGAT
TATTCCGTTGGACAATTTTTTGAGGATGCAAGGCAAACTACCAGAGATATCCTTGATAGG
GGCCGCGTTCCAATAGTTGCTGGTGGTACTGGATTATATTTACGGTGGTTTATTTATGGG
AAGCCAGATGTTCCAAAAGCATCTCGAGAGATTACCTCTGAAGTCTACTCAGAGCTTGCA
AATTTACAGAATGATTATGACTGGGATGCTGCTGTTCAGTTATTGGTTAAAGCTGGTGAT
GCTGGTGCCCAGTCTTTAGCGGCAAATGATTGGTACCGCTTGCGCCGCAGGCTTGAAATT
ATTAAGTCTAGTGGGTCACCTCCATCAGCCTTTGAAGTCCCATATAATTCTTTCAGAGAA
CAGCTTGATTCAGGTGTAGCAGATGCTGCTGATGTCAAGAATTCTGCTGACAAATTGCAG
CAGAGTAACAAAAAGGATTTGGAGTATGATTTTCTTTGTTATTTCCTTTCCACCAATAGG
CTGGATCTCTATAGATCAATTGATTTCCGGTGTGAAGATATGCTTTTAGGAACAGATGGA
ATTCTATCTGAGGCAAGGTGGCTTCTTGATTTGGGTCTTTTGCCAAACTCAAATTCTGCA
ACTCGAGCAATTGGTTACCGACAAGCAATGGAATACCTTCTAAGATGTAGAGAATATGGA
AGTTGGAATTCTGCTGGGGACTTCTATGAGTTTTTATCTGAATTCCAGAAAGCATCTAGA
AATTTTGCAAAAAGGCAGATGACTTGGTTTCGCAATGAACAGATTTATGAGTGGATAGAT
GCTTCTAAACCTTTGGAAAAGGTGCTAAGCTTCATATGTGATTCATACAGCAGTCAGGAA
GGCCATCTCCAGGTGCCTGAGTCACTTCGTATGAAGAAAGATATTAGAAACCCCCGCCAA
GTAGCAGAACTGAAGGCCTATCGTACTAGAAATAGGCATTTCATTGGGCGTGAGGATTGC
TCTGATGTTCTAGACTGGATAAAGACAATGTATTGTGAAGCCACTGTGTCTTCTTT

Peptide Sequence

PEP ID

XP_016458461.1
PEP Infomation

PREDICTED: tRNA dimethylallyltransferase 9-like [Nicotiana tabacum]
Sequence

MISTVGTGGVRISSYLRLSYTAETPLLLPNVLFFRRCSRRFFTSCSASSTKQKVIVISGP
TGAGKSKLALELAKQLNGEIISADSVQVYRGLDVGSAKPSIREREEVVHHLVDILHPSED
YSVGQFFEDARQTTRDILDRGRVPIVAGGTGLYLRWFIYGKPDVPKASREITSEVYSELA
NLQNDYDWDAAVQLLVKAGDAGAQSLAANDWYRLRRRLEIIKSSGSPPSAFEVPYNSFRE
QLDSGVADAADVKNSADKLQQSNKKDLEYDFLCYFLSTNRLDLYRSIDFRCEDMLLGTDG
ILSEARWLLDLGLLPNSNSATRAIGYRQAMEYLLRCREYGSWNSAGDFYEFLSEFQKASR
NFAKRQMTWFRNEQIYEWIDASKPLEKVLSFICDSYSSQEGHLQVPESLRMKKDIRNPRQ
VAELKAYRTRNRHFIGREDCSDVLDWIKTMYCEATVSSLITNS

Transcript Sequence

Gene sequence data has not been registered.